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seandavi / GEOquery

The bridge between the NCBI Gene Expression Omnibus and Bioconductor
http://seandavi.github.io/GEOquery/
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Fixed: Make sure `parseCharacteristics` flag passes #61

Closed kalugny closed 6 years ago

kalugny commented 6 years ago

Two fixes to GEOquery:

  1. Fixed: Make sure parseCharacteristics flag passes from getAndParseGSEMatrices to parseGSEMatrix
  2. Fixed: Handle Matrix files where the fields span several lines
kalugny commented 6 years ago

Fixes #60 and #62

codecov-io commented 6 years ago

Codecov Report

Merging #61 into master will increase coverage by 0.11%. The diff coverage is 100%.

Impacted file tree graph

@@            Coverage Diff            @@
##           master     #61      +/-   ##
=========================================
+ Coverage   60.98%   61.1%   +0.11%     
=========================================
  Files           9       9              
  Lines         687     689       +2     
=========================================
+ Hits          419     421       +2     
  Misses        268     268
Impacted Files Coverage Δ
R/parseGEO.R 63.29% <100%> (+0.19%) :arrow_up:

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kalugny commented 6 years ago

This became too big. I need to split it to separate requests