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SpatialFeatureExperiment workshop #11

Closed lambdamoses closed 1 year ago

lambdamoses commented 1 year ago

Please supply the following information:

Short title: SpatialFeatureExperiment Bioc2022 Workshop URL: https://github.com/lambdamoses/SFEWorkshop Workshop docker image: ghcr.io/lambdamoses/sfeworkshop Workshop port: 8787 Workshop memory request: 4GB Workshop description: In this workshop, we demonstrate the new SpatialFeatureExperiment S4 class that integrates SpatialExperiment with sf Simple Features to bring geospatial tools to spatial transcriptomics. First, we present the structure and interactions with the SFE class. Next, we present the Voyager package for exploratory spatial data analyses with the SFE class.

I'm demonstrating parallel processing. At most 2 cores are used. Is it possible to request 2 CPU cores?

seandavi commented 1 year ago

The machines that Orchestra uses are not large (just meant for demonstration purposes), but you should still be able to demonstrate parallel processing.

seandavi commented 1 year ago

Should be added now. Thanks for the contribution.