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seandavi / orchestra-contributions

For submitting and tracking Orchestra training platform contributions
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SEESAW #9

Closed mikelove closed 2 years ago

mikelove commented 2 years ago

Please supply the following information:

Short title: SEESAW: Statistical Estimation Of Allelic Expression Using Salmon And Swish Workshop URL: eg., https://github.com/mikelove/Bioc2022AllelicExpression/ Workshop docker image: eg., ghci.io/mikelove/Bioc2022AllelicExpression Workshop port: eg., 8787 for Rstudio-based workshops Workshop memory request: eg., 2GB Workshop description: In this workshop, we will cover a newly developed suite of tools for performing analysis of allelic expression in Bioconductor. You will learn about how we use upstream tools like g2gtools and Salmon to quantify allelic expression for RNA-seq, and then how to explore the data in R using the fishpond package. Altogether we call this suite of tools SEESAW for "Statistical Estimation Of allelic Expression Using Salmon And sWish".

seandavi commented 2 years ago

Should be in. Thanks, @mikelove