seattleflu / id3c-customizations

Extensions of ID3C for the Seattle Flu Study
MIT License
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Use LIMS API for PHSKC Metadata Parse and Sample Matching #357

Closed bencap closed 1 year ago

bencap commented 1 year ago

Deprecates our use of the aliquoting sheets during the PHSKC clinical parsing routine in favor of making calls to the LIMS API in order to fetch the sample identifiers for records based on PHSKC CIDs.

Adds a function that prepares LIMS API requests with HMAC signing. This function can be used by other routines as we remove all uses of the aliquoting sheets from our processes.

Must be merged alongside https://github.com/seattleflu/backoffice/pull/362

bencap commented 1 year ago

Deployed.