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sebapersson / PEtab.jl

Create parameter estimation problems for ODE models
https://sebapersson.github.io/PEtab.jl/stable/
MIT License
28 stars 4 forks source link

Enable symbolic indexing for PEtab results? #173

Open TorkelE opened 5 months ago

TorkelE commented 5 months ago

Just writing stuff here as I get ideas, feel free to close/consolidate to single issues if easier to handle that way.

It could be neat to permit accessing a parameters (optimal) value from a PEtab result like:

res = calibrate_model_multistart(petab_problem, ...)
res[p1]

to get its value.

Long-term, if rerouting through OptimizationProblems this would be handled automatically. However, it seems unlikely that SciML/Optimization will have full support for desired stuff (e.g. saving traces for plotting) any time soon.

sebapersson commented 2 months ago

I think this would be great. Will have it on the TODO for v3.0.