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sebotic / repurpos.us

a drug repurposing portal based on Wikidata
http://ReFrameDB.org
Apache License 2.0
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Search result lacks similar compounds #124

Closed sebotic closed 5 years ago

sebotic commented 6 years ago

It seems that under certain conditions, search results lack similar compounds on the frontend, although these are being returned by the backend.

Example: execute the following search: https://reframedb.org/#/search?query=CEFDALOXIME%20PENTEXIL&type=string

Last result lacks similar compounds.

Execute the same search with a direct API call, the similar compounds are there as expected. search API result https://reframedb.org/api/search?query=CEFDALOXIME%20PENTEXIL&type=string

sebotic commented 6 years ago

On the compounds page, the similar compounds seem to be displayed just fine, so this should only be a minor thing

flaneuse commented 6 years ago

@sebotic no similar compounds are returned if the compound is in the Reframe library. My understanding of Calibr's desired functionality was that "similar compounds" in the search results was only intended to show similar reframe compounds, not all compounds, and only if it wasn't in the library. If this is still the ideal behavior, the backend needs to filter out the non-Reframe similar compounds.

@andrewsu @sebotic what do we want the behavior to be?

  1. Red dot if in RFM collection, show similar RFM compounds if not.
  2. Red/white dot if in RFM collection, show all similar compounds, regardless if the compound itself is in the library