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seguid / seguid-tcl

SEGUID v2: Checksums for Linear, Circular, Single- and Double-Stranded Biological Sequences
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Don't echo input string #1

Closed HenrikBengtsson closed 4 months ago

HenrikBengtsson commented 4 months ago

To align with the CLI implementations of the other languages (currently Python and R), please drop the

input:TAAAATT

output from:

$ seguid --type=cdseguid <<< "TAAAATT"
input:TAAAATT
cdseguid=tPOOjAPjLqsrTL42W8HaPKlfRsk

so we only get:

$ seguid --type=cdseguid <<< "TAAAATT"
cdseguid=tPOOjAPjLqsrTL42W8HaPKlfRsk

See also https://www.seguid.org/ for examples what we get with Python and R right now.

PS. We can discuss whether we should add something like --debug to the CLI to output more information, e.g. what the input sequence is.

HenrikBengtsson commented 4 months ago

I've dropped this, cf. https://github.com/seguid/seguid-tcl/commit/bb5bae278b5bc332272fbeb61a12414b644d83d0