Closed JoseCorCab closed 1 year ago
It would be very interesting to add a new vulcano plot to the 'freak section' using integrated Log2FC and P values. Two improvements of this plot could be i) to add FDR thesholds like p3 plot in https://samdsblog.netlify.app/post/visualizing-volcano-plots-in-r/ and ii) to add labels to the most significant genes, similar to the plots in https://biocorecrg.github.io/CRG_RIntroduction/volcano-plots.html. We have to check this ggplot based package too https://bioconductor.org/packages/release/bioc/html/EnhancedVolcano.html
It would be very interesting to add a new vulcano plot to the 'freak section' using integrated Log2FC and P values. Two improvements of this plot could be i) to add FDR thesholds like p3 plot in https://samdsblog.netlify.app/post/visualizing-volcano-plots-in-r/ and ii) to add labels to the most significant genes, similar to the plots in https://biocorecrg.github.io/CRG_RIntroduction/volcano-plots.html. We have to check this ggplot based package too https://bioconductor.org/packages/release/bioc/html/EnhancedVolcano.html