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seppinho / haplogrep-cmd

HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
https://haplogrep.i-med.ac.at/
MIT License
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haplogrep on non-human species #42

Open leleory opened 3 years ago

leleory commented 3 years ago

Dear all, Is it possible to run haplogrep2 on non-human species to identify haplogroups? If not, what additional information would I need if I wanted to set this up on another model organism? Apologies for the very general questions, I have tried the link to the google groups discussion forum, but that appears to be non-functional. Any suggestions would be appreciated. Thanks, Lel

seppinho commented 3 years ago

Hi Lel, Basically possible but you would to set up a tree structure similar to Phylotree.