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seppinho / haplogrep-cmd

HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
https://haplogrep.i-med.ac.at/
MIT License
74 stars 23 forks source link

Errors if Whole Genome VCF Input #50

Open DarioS opened 1 year ago

DarioS commented 1 year ago

It would be nice if the software could parse only chrM entries without requiring the creation of redundant files on disk.

Error! Position 4724329 outside the range. Please double check if VCF includes variants mapped to rCRS only. Error! Position 4724496 outside the range. Please double check if VCF includes variants mapped to rCRS only. Error! Position 4724670 outside the range. Please double check if VCF includes variants mapped to rCRS only.