kashyapchhatbar
commented
2 years ago Because latest tbb library no longer imports via
#include <tbb/pipeline.h>
#include <tbb/task_scheduler_init.h>It should be changed to the following and flexbar devs need to update a lot of code which uses the deprecated pipeline from tbb.
#include <tbb/parallel_pipeline.h>For a temporary solution, you can use an older version of https://github.com/oneapi-src/oneTBB like 2020.02 (which worked for me)
Hi sir,
We have followed commands mentioned in manuel
tar xzf flexbar-3.5.0.tar.gz
tar xJf seqan-library-2.4.0.tar.xz
mv seqan-library-2.4.0/include flexbar-3.5.0
cd flexbar-3.5.0 cmake . make
but it shows error at after make command
cmake . -- Flexbar 64 bit architecture -- Could NOT find BZip2 (missing: BZIP2_LIBRARIES BZIP2_INCLUDE_DIR) -- Build will not support bzip2. -- Configuring done -- Generating done -- Build files have been written to: /home/ngc-bioinfo/Downloads/flexbar-3.5.0 ngc-bioinfo@ngc-bioinfo:~/Downloads/flexbar-3.5.0$ make [ 50%] Building CXX object src/CMakeFiles/flexbar.dir/Flexbar.cpp.o In file included from /home/ngc-bioinfo/Downloads/flexbar-3.5.0/src/Flexbar.cpp:24:0: /home/ngc-bioinfo/Downloads/flexbar-3.5.0/src/Flexbar.h:15:10: fatal error: tbb/pipeline.h: No such file or directory
include <tbb/pipeline.h>
compilation terminated. src/CMakeFiles/flexbar.dir/build.make:62: recipe for target 'src/CMakeFiles/flexbar.dir/Flexbar.cpp.o' failed make[2]: [src/CMakeFiles/flexbar.dir/Flexbar.cpp.o] Error 1 CMakeFiles/Makefile2:85: recipe for target 'src/CMakeFiles/flexbar.dir/all' failed make[1]: [src/CMakeFiles/flexbar.dir/all] Error 2 Makefile:83: recipe for target 'all' failed make: *** [all] Error 2
we cant install latest version in other way via sudo apt install flexbar if you can please help me to resolve this
Thank you