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seqan / hibf

HIBF and IBF
https://docs.seqan.de/hibf
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[MISC] Allow insert_iterator on std::vector #131

Closed eseiler closed 11 months ago

eseiler commented 11 months ago

For 64 bins:

Before:

Wall clock time [s]: 8369.69
Peak memory usage [GiB]: 34.0

After:

Wall clock time [s]: 4355.40
Peak memory usage [GiB]: 34.0
vercel[bot] commented 11 months ago

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codecov[bot] commented 11 months ago

Codecov Report

All modified lines are covered by tests :white_check_mark:

Comparison is base (570264f) 99.62% compared to head (cf2af40) 99.63%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #131 +/- ## ======================================= Coverage 99.62% 99.63% ======================================= Files 40 41 +1 Lines 1348 1361 +13 ======================================= + Hits 1343 1356 +13 Misses 5 5 ``` | [Files](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan) | Coverage Δ | | |---|---|---| | [include/hibf/config.hpp](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9oaWJmL2NvbmZpZy5ocHA=) | `100.00% <ø> (ø)` | | | [include/hibf/misc/insert\_iterator.hpp](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9oaWJmL21pc2MvaW5zZXJ0X2l0ZXJhdG9yLmhwcA==) | `100.00% <100.00%> (ø)` | | | [src/build/compute\_kmers.cpp](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL2J1aWxkL2NvbXB1dGVfa21lcnMuY3Bw) | `100.00% <100.00%> (ø)` | | | [src/build/insert\_into\_ibf.cpp](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL2J1aWxkL2luc2VydF9pbnRvX2liZi5jcHA=) | `100.00% <100.00%> (ø)` | | | [src/interleaved\_bloom\_filter.cpp](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL2ludGVybGVhdmVkX2Jsb29tX2ZpbHRlci5jcHA=) | `100.00% <ø> (ø)` | | | [src/sketch/compute\_sketches.cpp](https://app.codecov.io/gh/seqan/hibf/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL3NrZXRjaC9jb21wdXRlX3NrZXRjaGVzLmNwcA==) | `100.00% <ø> (ø)` | |

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