Closed Irallia closed 2 years ago
Merging #209 (6e47b08) into master (71ad200) will decrease coverage by
0.00%
. The diff coverage isn/a
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@@ Coverage Diff @@
## master #209 +/- ##
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- Coverage 98.35% 98.34% -0.01%
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Files 18 18
Lines 850 846 -4
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- Hits 836 832 -4
Misses 14 14
Impacted Files | Coverage Δ | |
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src/iGenVar.cpp | 100.00% <0.00%> (ø) |
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So it looks like using just long reads still works much better than using both short and long reads combined? Also what is the difference between mate pair and paired-end?
So it looks like using just long reads still works much better than using both short and long reads combined? Also what is the difference between mate pair and paired-end?
Yes, I had a discussion with Knut today aswell. And yes it just looks like out short read calling is very bad. We need to find out whats wrong there.
Illumina Mate Pair
Illumina Paired End