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seqan / raptor

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
https://docs.seqan.de/raptor
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update benchmarks #303

Closed Austernpilz closed 1 year ago

Austernpilz commented 1 year ago

--rearrange-user-bins is deprecated

grafik
eseiler commented 1 year ago

These scripts were used with https://github.com/seqan/raptor/tree/560a45f

I'm not sure yet if I intend to maintain the scripts, since they reflect what we did for the paper, and are not meant as a benchmark. (Also, they are hard to maintain without CI).

We will add general purpose benchmarks in the future.