seqan / raptor

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
https://docs.seqan.de/raptor
Other
52 stars 18 forks source link

[MISC] Remove filenames from HIBF data structure #310

Closed smehringer closed 1 year ago

vercel[bot] commented 1 year ago

The latest updates on your projects. Learn more about Vercel for Git ↗︎

Name Status Preview Comments Updated (UTC)
raptor ✅ Ready (Inspect) Visit Preview 💬 Add feedback May 9, 2023 9:50am
codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 100.00% and no project coverage change.

Comparison is base (f03a053) 100.00% compared to head (259f0d2) 100.00%.

:exclamation: Current head 259f0d2 differs from pull request most recent head cec912c. Consider uploading reports for the commit cec912c to get more accurate results

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #310 +/- ## ========================================= Coverage 100.00% 100.00% ========================================= Files 63 63 Lines 2161 2145 -16 ========================================= - Hits 2161 2145 -16 ``` | [Impacted Files](https://app.codecov.io/gh/seqan/raptor/pull/310?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan) | Coverage Δ | | |---|---|---| | [include/raptor/build/hibf/build\_data.hpp](https://app.codecov.io/gh/seqan/raptor/pull/310?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9yYXB0b3IvYnVpbGQvaGliZi9idWlsZF9kYXRhLmhwcA==) | `100.00% <ø> (ø)` | | | [...e/raptor/hierarchical\_interleaved\_bloom\_filter.hpp](https://app.codecov.io/gh/seqan/raptor/pull/310?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9yYXB0b3IvaGllcmFyY2hpY2FsX2ludGVybGVhdmVkX2Jsb29tX2ZpbHRlci5ocHA=) | `100.00% <ø> (ø)` | | | [src/build/hibf/chopper\_build.cpp](https://app.codecov.io/gh/seqan/raptor/pull/310?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL2J1aWxkL2hpYmYvY2hvcHBlcl9idWlsZC5jcHA=) | `100.00% <ø> (ø)` | | | [src/build/hibf/hierarchical\_build.cpp](https://app.codecov.io/gh/seqan/raptor/pull/310?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL2J1aWxkL2hpYmYvaGllcmFyY2hpY2FsX2J1aWxkLmNwcA==) | `100.00% <100.00%> (ø)` | | | [src/build/hibf/update\_user\_bins.cpp](https://app.codecov.io/gh/seqan/raptor/pull/310?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-c3JjL2J1aWxkL2hpYmYvdXBkYXRlX3VzZXJfYmlucy5jcHA=) | `100.00% <100.00%> (ø)` | |

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Do you have feedback about the report comment? Let us know in this issue.