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seqan / raptor

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
https://docs.seqan.de/raptor
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[MISC] Reuse compute_kmers in insert_to_ibf. #323

Closed smehringer closed 1 year ago

smehringer commented 1 year ago

Now this is something I need to benchmark.

The only difference is that a robin_hood::unordered_set is used instead of storing the values in a std::vector<uint64_t>.

IF this leads to a decrease in performance we need to have an compute_kmers overload on a vector.

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