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seqan
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raptor
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
https://docs.seqan.de/raptor
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Option for writing timings to file
#391
Closed
eseiler
closed
10 months ago
eseiler
commented
11 months ago
--timing-output <file>
Create new (error if exists)
Tab separated with header
Peak memory in bytes (unformatted)
Also add index size to cerr (formatted) and file (unformatted)
Notes @smehringer:
report that Query IBF is the sum of threads
--timing-output <file>Notes @smehringer: