seqan / raptor

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
https://docs.seqan.de/raptor
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Bump nf-core/setup-nextflow from 1 to 2 #414

Closed dependabot[bot] closed 6 months ago

dependabot[bot] commented 6 months ago

Bumps nf-core/setup-nextflow from 1 to 2.

Release notes

Sourced from nf-core/setup-nextflow's releases.

v2.0.0

Added

  • renovate dependency automation bot (#41)

Changed

  • Upgraded GitHub Actions node version to v20 (#39)
  • GitHub Octokit API switched to nf-core custom API (#37)

v1.5.2

Added

  • CI workflow steps for better compatibility with https://github.com/nektos/act
  • Visual Studio Code debugging configuration
  • Husky pre-commit hooks for linting and formatting
  • Deprecation messages to warn users of upcoming API switch

v1.5.1

Changed

  • API calls are now lazy loaded to avoid making unnecessary calls (#33)

v1.5.0

Added

  • Throttling support to retry failed API calls (#31)

Changed

  • Octokit API calls refactored and separated from install script (#29)

v1.4.0

Changed

  • If fs.renameSync fails (e.g. because source and destination files are on different partitions), try fs.copySync and fs.unlinkSync instead (#14).
  • Fail instead of warn, when `nextflow help`` doesn't work (#23).

Fixed

  • Re-enable npm run test in CI (#15).
  • Fix release version check in unit test (#15).
  • Add helper function for checking the latest releases in the unit tests (#15).

v1.3.0

Changed

  • Action now checks tool cache for installed version before querying Octokit (#5/#10)

v1.2.0

... (truncated)

Changelog

Sourced from nf-core/setup-nextflow's changelog.

Commits


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vercel[bot] commented 6 months ago

The latest updates on your projects. Learn more about Vercel for Git ↗︎

Name Status Preview Updated (UTC)
raptor ✅ Ready (Inspect) Visit Preview Mar 4, 2024 0:17am
codecov[bot] commented 6 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 100.00%. Comparing base (41a23c9) to head (de55af5).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #414 +/- ## ========================================= Coverage 100.00% 100.00% ========================================= Files 51 51 Lines 1682 1682 ========================================= Hits 1682 1682 ```

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