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seqan / seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
https://www.seqan.de
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[FEATURE] libc++ support #3209

Closed eseiler closed 9 months ago

eseiler commented 9 months ago

Resolves #3207

vercel[bot] commented 9 months ago

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seqan3 ✅ Ready (Inspect) Visit Preview 💬 Add feedback Nov 13, 2023 9:18am
codecov[bot] commented 9 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Comparison is base (1b0b55f) 98.14% compared to head (e2dd179) 98.17%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #3209 +/- ## ========================================== + Coverage 98.14% 98.17% +0.03% ========================================== Files 269 269 Lines 11855 11852 -3 ========================================== + Hits 11635 11636 +1 + Misses 220 216 -4 ``` | [Files](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan) | Coverage Δ | | |---|---|---| | [...ude/seqan3/core/debug\_stream/debug\_stream\_type.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvY29yZS9kZWJ1Z19zdHJlYW0vZGVidWdfc3RyZWFtX3R5cGUuaHBw) | `92.30% <ø> (+15.38%)` | :arrow_up: | | [include/seqan3/io/sam\_file/format\_bam.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvaW8vc2FtX2ZpbGUvZm9ybWF0X2JhbS5ocHA=) | `94.55% <100.00%> (ø)` | | | [include/seqan3/io/sequence\_file/format\_embl.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvaW8vc2VxdWVuY2VfZmlsZS9mb3JtYXRfZW1ibC5ocHA=) | `100.00% <100.00%> (ø)` | | | [include/seqan3/io/sequence\_file/format\_fasta.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvaW8vc2VxdWVuY2VfZmlsZS9mb3JtYXRfZmFzdGEuaHBw) | `95.68% <100.00%> (ø)` | | | [include/seqan3/io/sequence\_file/format\_fastq.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvaW8vc2VxdWVuY2VfZmlsZS9mb3JtYXRfZmFzdHEuaHBw) | `92.03% <100.00%> (ø)` | | | [include/seqan3/io/sequence\_file/format\_genbank.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvaW8vc2VxdWVuY2VfZmlsZS9mb3JtYXRfZ2VuYmFuay5ocHA=) | `100.00% <100.00%> (ø)` | | | [...qan3/io/stream/detail/fast\_istreambuf\_iterator.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvaW8vc3RyZWFtL2RldGFpbC9mYXN0X2lzdHJlYW1idWZfaXRlcmF0b3IuaHBw) | `100.00% <100.00%> (ø)` | | | [...clude/seqan3/search/detail/search\_configurator.hpp](https://app.codecov.io/gh/seqan/seqan3/pull/3209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=seqan#diff-aW5jbHVkZS9zZXFhbjMvc2VhcmNoL2RldGFpbC9zZWFyY2hfY29uZmlndXJhdG9yLmhwcA==) | `96.77% <100.00%> (-0.20%)` | :arrow_down: |

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