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seqan
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slimm
Species Level Identification of Microbes from Metagenomes
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Question: How does slimm deal with discordant mapping of paired end reads?
#38
your-highness
opened
4 years ago
0
Add taxonomy info to coverage profile
#37
cdiener
closed
5 years ago
0
Explanation of species-level classifcation filed "s_unknown_species"
#36
your-highness
opened
5 years ago
6
can't download viral bowtie2 index
#35
tigerxu
closed
5 years ago
2
Accessions not mapped to taxaid
#34
your-highness
closed
5 years ago
1
--directory option causes a segmentation fault and produce bad profiles
#33
temehi
closed
5 years ago
3
[INTERNAL] change windows packaging ...
#32
temehi
closed
6 years ago
0
Windows support
#31
temehi
closed
6 years ago
0
[FIX] bug fix
#30
temehi
closed
6 years ago
0
various questions
#29
fconstancias
closed
6 years ago
2
[INTERNAL] added cereal as a git sub-module
#28
temehi
closed
6 years ago
0
[NOP] bump app version
#27
temehi
closed
6 years ago
0
[FEATURE] Single rank profile
#26
temehi
closed
6 years ago
0
[feature/question] get coverage profiles
#25
cdiener
closed
4 years ago
13
Segmentation fault during assigning reads to LCA
#24
sturne29
closed
5 years ago
8
strain level identification
#23
temehi
closed
6 years ago
0
Some bug fixes and Unified profile
#22
temehi
closed
6 years ago
0
New Preprocessing for SLIMM database
#21
temehi
closed
6 years ago
0
empty taxonomic profiles
#20
danfulop
closed
6 years ago
3
problem building from source
#19
danfulop
closed
6 years ago
2
build from source locally
#18
danfulop
closed
6 years ago
1
Custom Database Questions
#17
feltzmc
closed
7 years ago
2
Preprocessing
#16
temehi
closed
7 years ago
0
Can SLIMM provide report on sub species?
#15
zhangqunyuan
closed
7 years ago
2
Simulation tests failed!
#14
yeli7068
closed
7 years ago
10
[NOP] added citation info
#13
temehi
closed
7 years ago
0
[FEATURE] updated examples for command line help
#12
temehi
closed
7 years ago
0
[INTERNAL] bump version
#11
temehi
closed
7 years ago
0
Activate version check
#10
temehi
closed
7 years ago
0
Problem with bowtie2 example
#9
mikesioda
closed
7 years ago
3
Seqan 2.3.2 and packaging
#8
temehi
closed
7 years ago
0
Update README.md
#7
temehi
closed
7 years ago
0
[FIX] order in cmakelist
#6
temehi
closed
7 years ago
0
[INTERNAL] corrected version number
#5
temehi
closed
7 years ago
0
Static Linking Problems fixed
#4
temehi
closed
7 years ago
0
Feature/report all levels
#3
temehi
closed
7 years ago
0
Fixed multiple problems
#2
temehi
closed
7 years ago
0
Test unmapped
#1
temehi
closed
8 years ago
0