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seqeralabs
/
seqera-kit
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
Apache License 2.0
25
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6
forks
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feat: add flag for emitting version info, refactor parseargs
#120
ejseqera
closed
8 months ago
0
fix: fix delete/overwrite bug with workspaces
#119
ejseqera
closed
8 months ago
0
fix: type parsing for ces,actions,credentials
#118
ejseqera
closed
8 months ago
0
credentials yaml depends on `type` being the dict name
#117
max-l-weaver
closed
8 months ago
2
[Feature] Forward reference for datasets/datalinks
#116
swampie
opened
8 months ago
1
--delete flag not working as expected
#115
max-l-weaver
closed
8 months ago
3
Adding option to pass in yaml via stdin
#114
max-l-weaver
closed
6 months ago
1
Tempfiles generated for config, params, pre-run don't get read in properly
#113
ejseqera
closed
8 months ago
1
Draft: Add feature to emit YAMLs of existing entities
#112
ejseqera
opened
10 months ago
0
Add CLI option to emit version info
#111
ejseqera
closed
8 months ago
1
Release v0.4.5
#110
ejseqera
closed
10 months ago
0
Add info about setting TOWER_API_ENDPOINT to README
#109
ejseqera
closed
8 months ago
1
feat: add better error handling for empty yaml
#108
ejseqera
closed
10 months ago
0
Update docs for installation, YAML definitions and templates
#107
ejseqera
closed
10 months ago
0
Update docs to include info for installing from source
#106
ejseqera
closed
10 months ago
1
Create output file when generating resources with CLI
#105
adamrtalbot
opened
10 months ago
2
Break up the YAML into smaller chunks
#104
adamrtalbot
closed
11 months ago
0
bug: Using an empty YAML creates raises a NoneType error
#103
adamrtalbot
closed
8 months ago
1
SD-39 add end to end integration testing for seqerakit
#102
adamrtalbot
closed
11 months ago
2
[DO NOT MERGE] SD-39 add end to end integration testing for seqerakit
#101
adamrtalbot
closed
11 months ago
2
fix: boolean value parsing for keys
#100
ejseqera
closed
11 months ago
0
Remove boolean flags entirely if `False`
#99
ejseqera
closed
11 months ago
1
Release v0.4.4
#98
ejseqera
closed
11 months ago
0
fix: fix env var parsing in params block with params-file
#97
ejseqera
closed
11 months ago
0
Release v0.4.3
#96
ejseqera
closed
11 months ago
0
docs: add details on yaml config options, new info arg
#95
ejseqera
closed
11 months ago
0
Protect main branch against direct push?
#94
marcodelapierre
closed
11 months ago
1
update python-testing : execute on PR too
#93
marcodelapierre
closed
11 months ago
1
Add docs for seqerakit specific yaml options
#92
ejseqera
closed
11 months ago
1
Allow direct passing of dictionaries to seqera kit python module
#91
grantn5
opened
11 months ago
0
feat: support params and params-file keys
#90
ejseqera
closed
11 months ago
0
feat: add info flag and support for tw info
#89
ejseqera
closed
11 months ago
0
FIx overwrite
#88
ejseqera
closed
11 months ago
0
Unable to overwrite resources, despite setting 'overwrite: true'
#87
RHReynolds
closed
11 months ago
3
Release v0.4.2
#86
ejseqera
closed
11 months ago
0
fix: handling of cli errors and custom exp
#85
ejseqera
closed
11 months ago
0
Simplify install
#84
pinin4fjords
closed
11 months ago
0
Add support to create yamls of existing entities
#83
ejseqera
opened
11 months ago
0
Fix argparse in CLI interface
#82
ejseqera
closed
1 year ago
0
Update e2e CI tests
#81
ejseqera
closed
8 months ago
1
Support for bash specific syntax and sys.argv
#80
ejseqera
closed
1 year ago
0
fix: multi yaml parsing with same keys
#79
ejseqera
closed
1 year ago
0
Fix multiple yaml parsing with the same key
#78
ejseqera
closed
1 year ago
1
Fix handling of complex environment variables
#77
adamrtalbot
closed
1 year ago
4
Release v0.4.1
#76
ejseqera
closed
1 year ago
0
docs: update license to apache 2.0
#75
ejseqera
closed
1 year ago
0
Error handling for environment variables not set
#74
ejseqera
closed
1 year ago
0
Access to seqera-kit repo
#73
marcodelapierre
closed
1 year ago
1
Error if variable in YAML not found in environment
#72
adamrtalbot
closed
1 year ago
1
Broken '--delete' flag
#71
ejseqera
closed
1 year ago
1
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