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sequana / rnaseq

RNA-seq, QC and differential analysis pipeline
BSD 3-Clause "New" or "Revised" License
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config file not configure properly for sequanix #18

Closed cokelaer closed 10 months ago

cokelaer commented 2 years ago 
INFO:sequanix:Creating form based on config file
'software_choice'
<string>:19: (WARNING/2) Bullet list ends without a blank line; unexpected unindent.
Traceback (most recent call last):
  File "/home/cokelaer/Work/github/forked/sequanix/sequanix/sequanix.py", line 749, in _update_sequana
    self.create_base_form()
 File "/home/cokelaer/Work/github/forked/sequanix/sequanix/sequanix.py", line 1141, in create_base_form
    rule_box = Ruleform(rule, contains, count, keywords, specials=specials)
  File "/home/cokelaer/Work/github/forked/sequanix/sequanix/widgets/widgets.py", line 108, in __init__
    option_widget = NumberOption(option, value)
  File "/home/cokelaer/Work/github/forked/sequanix/sequanix/widgets/widgets.py", line 281, in __init__
    self.number.setValue(value)
OverflowError: argument 1 overflowed: value must be in the range -2147483648 to 2147483647
Aborted (core dumped)
cokelaer commented 10 months ago

This is not a RNAseq pbl anymore but Qt with limited integer values.