sequana / rnaseq

RNA-seq, QC and differential analysis pipeline
BSD 3-Clause "New" or "Revised" License
17 stars 4 forks source link

add rnaseqc container and update rseqc #38

Closed cokelaer closed 10 months ago

cokelaer commented 10 months ago

add rnaseqc container fixing test and precommit update rseqc

coveralls commented 10 months ago

Pull Request Test Coverage Report for Build 7194192397


Changes Missing Coverage Covered Lines Changed/Added Lines %
sequana_pipelines/rnaseq/main.py 13 18 72.22%
<!-- Total: 13 18 72.22% -->
Files with Coverage Reduction New Missed Lines %
sequana_pipelines/rnaseq/main.py 2 79.87%
/home/runner/micromamba/envs/sequana_rnaseq/lib/python3.10/site-packages/sequana_pipelines/rnaseq/main.py 37 69.18%
/home/runner/micromamba/envs/sequana_rnaseq/lib/python3.8/site-packages/sequana_pipelines/rnaseq/main.py 37 69.18%
/home/runner/micromamba/envs/sequana_rnaseq/lib/python3.9/site-packages/sequana_pipelines/rnaseq/main.py 37 69.18%
<!-- Total: 113 -->
Totals Coverage Status
Change from base Build 7101921810: 0.7%
Covered Lines: 469
Relevant Lines: 712

💛 - Coveralls