Hello, there was a typo in your docs that I corrected. Thank you for your code!

sequencing / isaac_variant_caller

This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka

https://github.com/Illumina/strelka

Other

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Closed raonyguimaraes closed 11 years ago

raonyguimaraes commented 11 years ago

gzip -dc my_sample.genome.vcf.gz |\ extract_variants |\ awk '/^#/ || $7 == "PASS"' >\ all_passed_variants.vcf

ctsa commented 11 years ago

Sorry about that. Thanks for the fix.