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serratus-bio / tantalus

R Data Exploration for Serratus
https://github.com/ababaian/serratus
GNU General Public License v3.0
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Some wrong in the installation of tantalus on R version 4.0.0 in windows #10

Open holypeggy opened 2 years ago

holypeggy commented 2 years ago

Hi, all There is some wrong in the installation of tantalus. I am glad if you can provide some value suggestion. ​The following is the ERROR. I think there is something in the compilation of the package. And i re-install the Rtools. However, i sitll can't fix the error. The R version i used is 4.12 in windows. The same problem also happen in the R 4..0.0. I hope you can give me some help. Thanks! Best wishes! Tong

install_github("serratus-bio/tantalus", INSTALL_opts = "--no-multiarch") Downloading GitHub repo serratus-bio/tantalus@HEAD These packages have more recent versions available. It is recommended to update all of them. Which would you like to update?

1: All
2: CRAN packages only
3: None
4: magrittr (2.0.1 -> 2.0.2 ) [CRAN] 5: Rcpp (1.0.5 -> 1.0.8 ) [CRAN] 6: lifecycle (1.0.0 -> 1.0.1 ) [CRAN] 7: ellipsis (0.3.1 -> 0.3.2 ) [CRAN] 8: cachem (1.0.3 -> 1.0.6 ) [CRAN] 9: glue (1.4.2 -> 1.6.1 ) [CRAN] 10: withr (2.4.1 -> 2.4.3 ) [CRAN] 11: rlang (0.4.10 -> 1.0.1 ) [CRAN] 12: crayon (1.4.1 -> 1.5.0 ) [CRAN] 13: later (1.1.0.1 -> 1.3.0 ) [CRAN] 14: R6 (2.5.0 -> 2.5.1 ) [CRAN] 15: mime (0.10 -> 0.12 ) [CRAN] 16: digest (0.6.25 -> 0.6.29) [CRAN] 17: utf8 (1.1.4 -> 1.2.2 ) [CRAN] 18: cli (2.3.0 -> 3.2.0 ) [CRAN] 19: colorspace (1.4-1 -> 2.0-2 ) [CRAN] 20: vctrs (0.3.6 -> 0.3.8 ) [CRAN] 21: pillar (1.4.6 -> 1.7.0 ) [CRAN] 22: fansi (0.4.1 -> 1.0.2 ) [CRAN] 23: viridisLite (0.3.0 -> 0.4.0 ) [CRAN] 24: farver (2.0.3 -> 2.1.0 ) [CRAN] 25: yaml (2.2.1 -> 2.2.2 ) [CRAN] 26: tibble (3.0.3 -> 3.1.6 ) [CRAN] 27: isoband (0.2.3 -> 0.2.5 ) [CRAN] 28: htmlwidgets (1.5.3 -> 1.5.4 ) [CRAN] 29: ggplot2 (3.3.3 -> 3.3.5 ) [CRAN] 30: tidyselect (1.1.0 -> 1.1.1 ) [CRAN] 31: generics (0.1.0 -> 0.1.2 ) [CRAN] 32: DBI (1.1.1 -> 1.1.2 ) [CRAN] 33: dplyr (1.0.4 -> 1.0.8 ) [CRAN] 34: blob (1.2.1 -> 1.2.2 ) [CRAN] 35: fst (0.9.4 -> 0.9.8 ) [CRAN] 36: data.table (1.13.6 -> 1.14.2) [CRAN] 37: viridis (0.5.1 -> 0.6.2 ) [CRAN] 38: dbplyr (2.1.0 -> 2.1.1 ) [CRAN]

Enter one or more numbers, or an empty line to skip updates: √ checking for file 'C:\Users\Tong\AppData\Local\Temp\RtmpCWrxFB\remotes1bc9843631742\serratus-bio-tantalus-f19948d/DESCRIPTION' (622ms)

Installing package into ‘C:/Users/Tong/Documents/R/win-library/4.0’ (as ‘lib’ is unspecified)

Matrix products: default

locale: [1] LC_COLLATE=Chinese (Simplified)_China.936 LC_CTYPE=Chinese (Simplified)_China.936
[3] LC_MONETARY=Chinese (Simplified)_China.936 LC_NUMERIC=C
[5] LC_TIME=Chinese (Simplified)_China.936

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] devtools_2.3.2 usethis_2.0.1

loaded via a namespace (and not attached): [1] rstudioapi_0.13 magrittr_2.0.1 pkgload_1.1.0 R6_2.5.0
[5] rlang_0.4.10 fastmap_1.1.0 tools_4.0.0 pkgbuild_1.2.0
[9] sessioninfo_1.1.1 cli_2.3.0 withr_2.4.1 ellipsis_0.3.1
[13] remotes_2.4.2 assertthat_0.2.1 rprojroot_2.0.2 lifecycle_1.0.0
[17] crayon_1.4.1 processx_3.4.4 purrr_0.3.4 callr_3.5.1
[21] fs_1.5.2 ps_1.3.4 testthat_2.3.2 curl_4.3
[25] memoise_2.0.0 glue_1.4.2 cachem_1.0.3 compiler_4.0.0
[29] desc_1.2.0 prettyunits_1.1.1

fransilvion commented 2 years ago

Hello, can you please try and install it on Windows now?

holypeggy commented 2 years ago

It works! Thank you fransilvion.

holypeggy commented 2 years ago

Please run this command: devtools::install_github("RcppCore/Rcpp"), if “The procedure entry point EXTPTR_PTR could not be located in the dynamic link library”.