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serrob23
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falsecolor
FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytoplasmic stain) to the traditional H&E histopathology color space.
GNU Affero General Public License v3.0
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Easy way to get this working for large pyramidal ome.tiff files?
#74
snibbor
opened
2 years ago
1
CudaSupportError: Error at driver init: CUDA driver library cannot be found
#73
pauliferni
opened
3 years ago
1
fixed call to getBackgroundLevels in color_script.py
#72
serrob23
closed
4 years ago
0
Develop
#71
serrob23
closed
4 years ago
0
Develop
#70
serrob23
closed
4 years ago
0
Develop
#69
serrob23
closed
4 years ago
0
Develop
#68
serrob23
closed
4 years ago
0
Develop
#67
serrob23
closed
4 years ago
0
Ihc develop
#66
serrob23
closed
4 years ago
0
took out astropy imports
#65
serrob23
closed
4 years ago
0
Ihc develop
#64
serrob23
closed
4 years ago
0
updated imports in init.py
#63
serrob23
closed
4 years ago
0
updated example notebooks and documentation
#62
serrob23
closed
4 years ago
0
Develop
#61
serrob23
closed
4 years ago
0
Develop merge
#60
serrob23
closed
4 years ago
0
Develop
#59
serrob23
closed
4 years ago
0
Interpolatefix
#58
serrob23
closed
4 years ago
0
Repo dev
#57
serrob23
closed
4 years ago
0
removed save image stats method from process and json import
#56
serrob23
closed
4 years ago
0
added python_requires to setup.py
#55
serrob23
closed
4 years ago
0
Develop
#54
serrob23
closed
4 years ago
0
added gaussianBlur method
#53
serrob23
closed
4 years ago
0
updated falseColor with normalization factors
#52
serrob23
closed
4 years ago
0
updated preprocess normalization factor as kwarg
#51
serrob23
closed
4 years ago
0
Develop
#50
serrob23
closed
4 years ago
0
fixed datatype error in segment nuclei
#49
serrob23
closed
4 years ago
0
Threshold update
#48
serrob23
closed
4 years ago
0
added binary closing to Eosin segmentation to remove pepper noise
#47
serrob23
closed
4 years ago
0
updated FalseColor.Color segmentNuclei to return a binary mask for Eo…
#46
serrob23
closed
4 years ago
0
Url fix
#45
serrob23
closed
4 years ago
0
updated setup with download url
#44
serrob23
closed
4 years ago
0
Url fix
#43
serrob23
closed
4 years ago
0
Publish ready
#42
serrob23
closed
4 years ago
0
Color correct
#41
serrob23
closed
4 years ago
0
added ViewImage method to process.py
#40
serrob23
closed
4 years ago
0
Clahe develop
#39
serrob23
closed
4 years ago
0
CLAHE develop
#38
serrob23
closed
4 years ago
0
Develop
#37
serrob23
closed
4 years ago
0
Clahe develop
#36
serrob23
closed
4 years ago
0
renamed run_normalization to run_FlatField in rapid_FalseColor in Col…
#35
serrob23
closed
4 years ago
0
Constants develop
#34
serrob23
closed
4 years ago
0
Constants develop
#33
serrob23
closed
4 years ago
0
Constants develop
#32
serrob23
closed
4 years ago
0
Constants develop
#31
serrob23
closed
4 years ago
0
updated kidney data
#30
serrob23
closed
4 years ago
0
Updated Color.py documentation.
#29
serrob23
closed
4 years ago
0
changed falseColor in Color.py so that it iterates through RGB_image …
#28
serrob23
closed
4 years ago
0
added documentation, added start/stop k parameters to setupH5/loadh5 …
#27
serrob23
closed
4 years ago
0
Data object develop
#26
serrob23
closed
4 years ago
0
updated license to GNU Affero General Public License v3.0
#25
serrob23
closed
5 years ago
0
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