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seung-lab
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connected-components-3d
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
GNU Lesser General Public License v3.0
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chore: see if we can build on MacOS
#68
william-silversmith
closed
3 years ago
0
perf: improve performance for very sparse images
#67
william-silversmith
closed
3 years ago
3
fix: max labels
#66
william-silversmith
closed
3 years ago
0
wip: experimenting with pixel prediction on 4-connected
#65
william-silversmith
opened
3 years ago
0
fix(return_N): set N for early returns
#64
william-silversmith
closed
3 years ago
0
the segmentation number is 0 when the segmentation array is the same object
#63
xiuliren
closed
3 years ago
1
wip: trying to make a BitArray class
#62
william-silversmith
opened
3 years ago
0
perf: half passes
#61
william-silversmith
closed
3 years ago
1
perf: skip relabeling if all labels would exactly match existing
#60
william-silversmith
closed
3 years ago
0
feat: rapid label extraction
#59
william-silversmith
closed
3 years ago
1
perf: improved decision tree for 26-connected
#58
william-silversmith
closed
3 years ago
0
Using cc3d with multiple channels?
#57
sneh-debug
closed
3 years ago
11
Visualization
#56
Ademord
closed
3 years ago
5
perf: num_transitions rather than num_foreground + return_N + automatic out_dtype + remove sparse
#55
william-silversmith
closed
3 years ago
0
perf+feat: sparse mode
#54
william-silversmith
closed
3 years ago
0
perf: skip second pass if all zeros
#53
william-silversmith
closed
3 years ago
0
the limit of union-find array is 65535?
#52
lvbirui
closed
3 years ago
2
fix: check to make sure dynamic memory allocations succeed
#51
william-silversmith
closed
3 years ago
0
perf: seems putting an if before evaluating two checks helps
#50
william-silversmith
closed
3 years ago
0
perf: improved 6-connected decision tree
#49
william-silversmith
closed
3 years ago
1
feat(voxel_connectivity_graph): extracts directed voxel connectivity …
#48
william-silversmith
closed
3 years ago
4
perf: use phantom label technique to speed up 8-connected
#47
william-silversmith
closed
3 years ago
0
perf: use a better decision tree to avoid unifies for 6-connected
#46
william-silversmith
closed
3 years ago
2
perf(relabel): collapse union-find into simple array remap
#45
william-silversmith
closed
3 years ago
0
perf: use block based decision tree for 4-connected problem
#44
william-silversmith
closed
3 years ago
5
perf(binary images): reduce max_labels based on theoretical maximums
#43
william-silversmith
closed
3 years ago
1
wip: trying out bbdt for 2D boolean case
#42
william-silversmith
opened
4 years ago
0
List of label indices?
#41
atpolonsky
closed
2 years ago
7
Apply mask prior to segmentation?
#40
atpolonsky
closed
4 years ago
7
perf: specialization for 8-connected
#39
william-silversmith
closed
4 years ago
0
Will it work with pointcloud data?
#38
chowkamlee81
closed
4 years ago
2
Better Algorithm Mk. II
#37
william-silversmith
opened
4 years ago
7
perf: faster region graph function
#36
william-silversmith
closed
4 years ago
0
perf: limit union-find allocation by maximum representation size
#35
william-silversmith
closed
4 years ago
2
Pictured Example
#34
aliakbarera
closed
4 years ago
21
feat: support non-32-bit output types
#33
william-silversmith
closed
4 years ago
1
14 Connected
#32
william-silversmith
opened
4 years ago
0
feat: find_contact_points between two labels in 3D volume
#31
manuel-castro
closed
3 years ago
2
Init block running
#30
fratim
closed
4 years ago
0
3d small object cannot removed when use cc3d. connected-compoenents?
#29
selvakarna
closed
5 years ago
4
Memory issue when i working with connected-components-3d ? volume images shape are 1000 X 1500 X 7000 ?
#28
selvakarna
closed
5 years ago
4
perf: remove duplicate checks in region_graph
#27
william-silversmith
closed
5 years ago
1
feat: add 6 and 18 connected functions
#26
william-silversmith
closed
5 years ago
0
6-connected for DNS
#25
hannahmenke
closed
5 years ago
3
ValueError: numpy.ufunc size changed, may indicate binary incompatibility
#24
skamdar
closed
5 years ago
3
How to extract 3D components from Binary 3D using cc3d package?
#23
selvakarna
closed
5 years ago
9
How differentiate small 3d objects from 3D Volume ?using How to remove small object [3d volume] using cc3d.connected_components?
#22
selvakarna
closed
5 years ago
1
How to remove small object [3d volume] using cc3d.connected_components ?
#21
selvakarna
closed
5 years ago
5
feat: very slow region graph function
#20
william-silversmith
closed
5 years ago
0
perf: save time and memory by not copying to numpy array
#19
william-silversmith
closed
5 years ago
1
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