seung-lab / fill_voids

Fill holes in binary 2D & 3D images fast.
GNU General Public License v3.0
16 stars 4 forks source link

upgrade pip precompiled for python 3.11 #7

Closed ashkanpakzad closed 1 year ago

ashkanpakzad commented 1 year ago

Hi, great tool!

Unfortunately, there are breaking changes to install in python 3.11 and fill_voids.cpp needs to be recompiled to install.

I'm not all that familiar with cython and C++ otherwise I would offer a pull request. I managed to install by cloning, deleting fill_voids.cpp, running the below from your comment

cython -3 --cplus fill_voids.pyx

and then install from local directory using pip.

It seems to work now. 👍🏽

william-silversmith commented 1 year ago

Will do!

william-silversmith commented 1 year ago

The new binaries have been on PyPI for a few days! Hope that helps. Thanks for reporting!