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sgibb / MALDIquant

Quantitative Analysis of Mass Spectrometry Data
https://strimmerlab.github.io/software/maldiquant/
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Unable to plot MALDI-TOF proteomics data collected in reflectron mode #73

Closed w2niva closed 2 years ago

w2niva commented 2 years ago

Thank you for providing with MALDIquant. I have peptide MALDI-TOF MS data collected in reflectron mode. My data are in .mzML format. I am unable to plot or process the data using MALDIquant. I am using MALDIquant to generate representative spectra for my paper. Please help!

sgibb commented 2 years ago

What did you try?

Isn't it just:

library("MALDIquant")
library("MALDIquantForeign")

s <- importMzMl("your.mzML")
plot(s[[1]])
sgibb commented 2 years ago

I am closing this issue because I am waiting for an answer for a long time. Please feel free to reopen it.