Closed jeanmanguy closed 5 years ago
Here, the regex for pepsin 1.3 ([FLWY]) is less stringent than the one for pepsin > 2 ([FL]) https://github.com/sgibb/cleaver/blob/c02266a21e422dfe4336cec02a755cc3204ced59/R/rules.R#L60-L63 But in the documentation of peptidecutter it says that pepsin at pH 1.3 is more specific.
[FLWY]
[FL]
Should the label for these regular expressions be swapped?
You are totally right! Thanks a lot for finding and reporting this problem!
Here, the regex for pepsin 1.3 (
[FLWY]
) is less stringent than the one for pepsin > 2 ([FL]
) https://github.com/sgibb/cleaver/blob/c02266a21e422dfe4336cec02a755cc3204ced59/R/rules.R#L60-L63 But in the documentation of peptidecutter it says that pepsin at pH 1.3 is more specific.Should the label for these regular expressions be swapped?