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sgoldenlab / simba

SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
https://simba-uw-tf-dev.readthedocs.io/
GNU General Public License v3.0
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Extract Features #60

Closed DJang11 closed 4 years ago

DJang11 commented 4 years ago

Hi, After I created a new project, and attempted to "Extract Features", however, instead I received this message on anaconda shell.

Exception in thread Thread-5: Traceback (most recent call last): File "c:\users\jean\anaconda3\envs\simba2\lib\threading.py", line 916, in _bootstrap_inner self.run() File "c:\users\jean\anaconda3\envs\simba2\lib\threading.py", line 864, in run self._target(*self._args, **self._kwargs) File "c:\users\jean\anaconda3\envs\simba2\lib\site-packages\simba\SimBA.py", line 4470, in extractfeatures extract_features_wotarget_8(self.projectconfigini) File "c:\users\jean\anaconda3\envs\simba2\lib\site-packages\simba\features_scripts\extract_features_8bp.py", line 60, in extract_features_wotarget_8 fps = float(currVideoSettings['fps']) File "c:\users\jean\anaconda3\envs\simba2\lib\site-packages\pandas\core\series.py", line 131, in wrapper raise TypeError("cannot convert the series to " "{0}".format(str(converter))) TypeError: cannot convert the series to <class 'float'>

I also got an error on SimBA GUI, so I checked video info on the file, but all seems correct. image

One thing I was concerning was that my laptop does not meet the minimum requirement you suggested. (spec is Windows10, 8GB RAM, & i5core). Does this error come due to the insufficient environment? In addition, I ran this program without GPU, and I have downloaded simba-uw-no-tf.

Best, Doyeon Jang

sgoldenlab commented 4 years ago

Hi @DJang11!

Check out this FAQ issue: https://github.com/sgoldenlab/simba/blob/SimBA_no_TF/docs/FAQ.md#when-i-try-to-execute-some-process-in-simba-eg-feature-extraction-or-generate-frames-or-videos-etc-i-get-a-typeerror-that-may-look-somthing-like-this

To understand if what might be happening, could you send me two screenshots, (1) of the content of your project_filder/csv/outlier_corrected_movement_location folder, and (2) the content of your project_folder/logs/video_info.csv file. That will help me a lot for understanding the issue.

Your computer specs should not be an issue! (Might be a little slow at times, but that's it)

Thanks!