GenomicsDBImport: Out of Memory Issue

shalabhsuman / variantCallingPipelineGermlineHC4

Germline Variant Calling Pipeline

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GenomicsDBImport: Out of Memory Issue #2

Open shalabhsuman opened 5 years ago

shalabhsuman commented 5 years ago

GATK4 will fail with following error code:

terminate called after throwing an instance of 'VariantStorageManagerException' what(): VariantStorageManagerException exception : Error while finalizing TileDB array chr1$14318$15218 TileDB error message : [TileDB::BookKeeping] Error: Cannot finalize book-keeping; Writing domain size failed