Support for SED-ML L1V2

[shalinshah1993]

The repeatedTask, introduced in Level 1 Version 2 of SED-ML, provides a generic looping construct, allowing repeated execution of complex tasks need to be supported. The implementation workflow of repeatedTasks will be as follows: First, resetModel determines if the model needs to reset or not followed by setting values at the beginning of each iteration. Finally, it sequentially iterates over each subTask (one or more tasks) for the range of values specified updating the setValue, if specified as elements in listOfChanges. If a list of range is specified, loop will be done over master range.

• [x] OneStep
• [x] SteadyState
• [x] RepeatedTask
  • [x] FunctionalRange
  • [x] VectorRange
  • [x] UniformRange

[shalinshah1993]

• After the latest commit, support for all three simulation types have been added. Now SBSCL supports UniformTimeCourse, SteadyState and OneStep simulations.

• Support for repeatedTasks has also been added. After task execution, a nested HashMap data structure is returned. For a repeatedTask this will be a map of maps.

More details can be found here:

https://github.com/shalinshah1993/SBSCL/blob/d464d84ea47e4ab66a0a3903fb4dcf061cd7678c/src/org/simulator/sedml/SedMLSBMLSimulatorExecutor.java#L288

@draeger @matthiaskoenig