Getting data from global environment does not work completely.

shamansim / Vizection

Shiny application for single cell transcriptomics studies data visualisation / exploration and quality control

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Getting data from global environment does not work completely. #5

Open charles-plessy opened 7 years ago

charles-plessy commented 7 years ago

I just realised that something like vizection(genes=genes[,1:10], .... will not work, because "genes[,1:10]" is not an object that we can recover from the global environment with get("genes[,1:10]", .GlobalEnv). It should rather be get("genes", .GlobalEnv)[,1:10], which requires more complex parsing. Maybe there is a better way to do it...

shamansim commented 6 years ago

Subsampling the dataset could also be a feature of vizection in the 'selection' tab.