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Spurious junction predictions #13

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago 
Certain Illumina datasets produce many spurious junction predictions. Known 
causes:

(1) Many reads containing the same sequence at seemingly random locations 
(possibly adaptor?)

(2) Counting read alignments that do not span negative overlap junctions gives 
them higher scores than they should have.

Original issue reported on code.google.com by jeffrey....@gmail.com on 1 Aug 2011 at 12:04

GoogleCodeExporter commented 8 years ago

Original comment by MDStr...@gmail.com on 5 Dec 2011 at 10:55