Gene strands and redundantly matched reads supporting junctions in output

shane-c-lawson / breseq

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Gene strands and redundantly matched reads supporting junctions in output #14

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago

Indicate with &rarr; or &larr; the direction of genes in output.

Italicize names of reads that map degenerately to junctions. (This will require 
setting a new BAM aux tag and understanding it).

Original issue reported on code.google.com by jeffrey....@gmail.com on 3 Aug 2011 at 6:27