search

shane-c-lawson / breseq

Automatically exported from code.google.com/p/breseq
Other
0 stars 0 forks source link

Improvements to FASTQ conversion feedback #18

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago 
Give more information about why a sequence is being converted.

Provide instructions on how to use the converted file for subsequent runs and 
create a subcommand CONVERT_FASTQ which performs conversion and also can 
rename/renumber reads.

Original issue reported on code.google.com by jeffrey....@gmail.com on 21 Aug 2011 at 6:32

GoogleCodeExporter commented 8 years ago 
Also output the number of bases in each file and quality score range?

Original comment by jeffrey....@gmail.com on 2 Dec 2011 at 6:04

GoogleCodeExporter commented 8 years ago 
Our solution is to force conversion, which is slow, but avoids these 
complications.

Original comment by jeffrey....@gmail.com on 5 Feb 2012 at 8:17