Translation of mutations may not deal with spliced genes and programmed frameshifts

shane-c-lawson / breseq

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Translation of mutations may not deal with spliced genes and programmed frameshifts #71

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago

Test case:

prfB in REL606

CDS             complement(join(2920937..2921959,2921961..2922035))
                    /gene="prfB"

Fix is to send location instead of position to function to get next base inside 
m_location.

Original issue reported on code.google.com by jeffrey....@gmail.com on 15 Sep 2013 at 9:19