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shendurelab / LACHESIS

The LACHESIS software, as described in Nature Biotechnology (http://dx.doi.org/10.1038/nbt.2727)
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Bareword found where operator expected at PreprocessSAMs.pl #48

Open mictadlo opened 6 years ago

mictadlo commented 6 years ago

Hi, I got the following errors:

Bareword found where operator expected at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near "// This"
        (Missing operator before This?)
Number found where operator expected at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near ") 2014"
        (Missing operator before 2014?)
Bareword found where operator expected at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near "2015 by"
        (Missing operator before by?)
syntax error at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near "// This software "
Unknown regexp modifier "/B" at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
  (Might be a runaway multi-line // string starting on line 17)
Unknown regexp modifier "/A" at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
Unknown regexp modifier "/M" at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
"use" not allowed in expression at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
Execution of /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl aborted due to compilation errors.

What did I miss?

Thank you in advance,

Michal

mictadlo commented 6 years ago

all // comments have to be removed