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shendurelab / LACHESIS

The LACHESIS software, as described in Nature Biotechnology (http://dx.doi.org/10.1038/nbt.2727)
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Doesn't build against new Samtools 1.0 release #5

Open aaronmck opened 9 years ago

aaronmck commented 9 years ago

LACHESIS no longer builds with the introduction of the htslib library and the release of the 1.0 version of Samtools. The includes in the gtools (and possibly other places in the code base) need to be fixed. This can be avoided by building against the 0.1.19 version.

s-andrews commented 9 years ago

If nothing else this needs to be mentioned on the install page - I hit the same issue and worked out why it didn't work, but people who aren't familiar with the history of samtools won't guess this.