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shendurelab / LACHESIS

The LACHESIS software, as described in Nature Biotechnology (http://dx.doi.org/10.1038/nbt.2727)
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SAMtool issue during compile step #9

Closed kainblue closed 9 years ago

kainblue commented 9 years ago

I am using samtools-1.2, it complains about hstlib and sam.h during SAMStepper.cc step In file included from SAMStepper.cc:2:0: SAMStepper.h:49:17: fatal error: sam.h: No such file or directory

include "sam.h"

             ^
kainblue commented 9 years ago

This one is solved when using the old version of samtools, specifically 0.1.19 Thanks a lot for Dr. Shendure and Martin Kircher's quick response and great suggestion