shendurelab / MPRAflow

A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data
Apache License 2.0
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Fix bugs; implement SNP workflow #61

Open ScottNortonPhD opened 2 years ago

ScottNortonPhD commented 2 years ago

The option to test specific variants is documented in the Nature Protocols paper but is not implemented here. This PR contains a draft implementation of the variant detection workflow. More importantly, it fixes two crashes, one in each of the association and count workflows.