Previously it was difficult to extract clusters following k-means clustering. I have updated the code to output the cluster number along with the genes in the go.list
plotlib.r
OrderGenesHeatmap() now returns a list containing the order of genes and the cluster order
plotheat() has been adjusted to accept a list from OrderGenesHeatmap()
and return the genes and their cluster as a list which will be saved as go.list by ngsplot.r
ExtractGName.r updated to cope with new go.list output
RGunning
commented
9 years ago
Previously it was difficult to extract clusters following k-means clustering. I have updated the code to output the cluster number along with the genes in the go.list
plotlib.r OrderGenesHeatmap() now returns a list containing the order of genes and the cluster order plotheat() has been adjusted to accept a list from OrderGenesHeatmap() and return the genes and their cluster as a list which will be saved as go.list by ngsplot.r
ExtractGName.r updated to cope with new go.list output