search

shenlab-sinai / ngsplot

Quick mining and visualization of NGS data by integrating genomic databases
Other
252 stars 65 forks source link

-RR (reduce ratio) parameter #53

Closed igordot closed 8 years ago

igordot commented 8 years ago

This is the documentation explanation:

    -RR  Reduce ratio(default=30). The parameter controls the heatmap height
           The smaller the value, the taller the heatmap

What exactly is it a ratio of?

lishen commented 8 years ago

The #of rows vs. the #of columns represented by each pixel for your heatmap.

Li

On Fri, Nov 13, 2015 at 10:00 PM, igor notifications@github.com wrote:

This is the documentation explanation:

-RR  Reduce ratio(default=30). The parameter controls the heatmap height
       The smaller the value, the taller the heatmap

What exactly is it a ratio of?

— Reply to this email directly or view it on GitHub https://github.com/shenlab-sinai/ngsplot/issues/53.

Li Shen, Ph.D. Computer Science Associate Professor Department of Neuroscience Icahn School of Medicine at Mount Sinai New York, NY 10029 ################# ngs.plot - the coolest NGS plotting tool: https://code.google.com/p/ngsplot/ Want ChIP-seq differential analysis? Use: https://code.google.com/p/diffreps/

lishen commented 8 years ago

This kind of questions shall be posted on the discussion forum. The issues are used for bugs and enhancements.

igordot commented 8 years ago

Thank you for the clarification. I would classify this comment as an enhancement. Although this is not related to the code, documentation is also important.