How to specify multiple kmer values

shenwei356 / kmcp

Accurate metagenomic profiling && Fast large-scale sequence/genome searching

https://bioinf.shenwei.me/kmcp

MIT License

182 stars 13 forks source link

Closed mbhall88 closed 1 year ago

mbhall88 commented 1 year ago

In the docs for compute it says

  -k, --kmer ints                 ► K-mer size(s). (default [21])

I tried -k 15 21 but that didn't work. How should multiple values be delimited?

shenwei356 commented 1 year ago

It 's comma-delimited,

-k  15,21

Or setting multiple times

-k 15 -k 21

mbhall88 commented 1 year ago

Ahhh I see. Thanks! Maybe add an example to the docs (and a comment in the --help)?