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shenwei356 / taxonkit

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
https://bioinf.shenwei.me/taxonkit
MIT License
357 stars 29 forks source link

taxid-changelog: support gzip-compressed dump files for saving space #78

Closed shenwei356 closed 1 year ago

shenwei356 commented 1 year ago

It's a small change to https://github.com/shenwei356/taxonkit/blob/master/taxonkit/cmd/taxid-changelog.go#L326-L341

  1. check if plain files exist. if yes, load as usual.
  2. if not, load the gzip files.
shenwei356 commented 1 year ago

supported