[x] This comment contains a description of changes (with reason)
[x] CHANGELOG.md is updated
[x] If you've fixed a bug or added code that should be tested, add tests!
[x] Documentation in wiki is updated
REASON
In the original amazon S3 bucket there were two folders: star_genome and mass_spec. Using Zenodo as a location instead meant Nextflow would need to understand how to deal with a tar.gz, that is a tar'd and zip'd contents of that folder similarly named. Respectively, the folders became star_genome.tar.gz and mass_spec.tar.gz.
SOLUTION
tar'd and gzipped star_genome_dir and mass_spec, as well as all the fasta files that were large and the RData file.
Updated the conf/test.config file for both the GitHub Actions that do the continuous integration and continuous testing functions, as well as just for testing to make sure the files work.
There is now an accompanying repository for our use.
PR checklist
CHANGELOG.mdis updatedwikiis updatedREASON In the original amazon S3 bucket there were two folders:
star_genomeandmass_spec. Using Zenodo as a location instead meant Nextflow would need to understand how to deal with atar.gz, that is a tar'd and zip'd contents of that folder similarly named. Respectively, the folders becamestar_genome.tar.gzandmass_spec.tar.gz.SOLUTION
tar'd and gzipped star_genome_dir and mass_spec, as well as all the fasta files that were large and the RData file.
Updated the conf/test.config file for both the GitHub Actions that do the continuous integration and continuous testing functions, as well as just for testing to make sure the files work.
There is now an accompanying
repository for our use.