How to better organize different data sources

sheynkman-lab / biosurfer

"Surf" the biological network, from genome to transcriptome to proteome and back to gain insights into human disease biology.

MIT License

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Open jsaquing opened 3 years ago

jsaquing commented 3 years ago

Ideas:

table storing information about each data source: name, most recent date that data was pulled from source, whether source is a reference database or a sequencing run
need to figure out how to associate different data sources with subclasses (e.g. GencodeTranscript, PacBioTranscript) that may have unique attributes (e.g. APPRIS level, SQANTI classification)