How to access the ROSMAP data?

shirondru / enformer_fine_tuning

For fine-tuning Enformer using paired WGS & gene expression data

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How to access the ROSMAP data? #3

Open HelloWorldLTY opened 5 days ago

HelloWorldLTY commented 5 days ago

Hi, thanks for your help previously, I have successfully got all your data from GTEx. Moreover, I wonder if there exists similar approaches to access the individual genome data from ROSMAP. Thanks a lot.

shirondru commented 2 days ago

The same approach should be usable for the ROSMAP data, just with different filenames. You will also need to apply for access for ROSMAP data first, though

HelloWorldLTY commented 1 day ago

I see, let me try it, thanks a lot.