Hi,
Why am I getting different results, especially in the ID column of the VCF file, using the same sample and the same MEGAnE software?
In addition, I pulled down the MEI search version "v1.0.0 2022/03/14" using a Singularity container. However, the MEI search version "v1.0.2 2022/05/03" was manually installed by us.
Using version "v1.0.0", I obtained 2040 MEIs in the MEI_final_percentile_genotyped.vcf file and 1232 MEAs in the absent_MEs_genotyped.vcf file. However, using version "v1.0.2", I obtained 2044 MEIs in the corresponding files and still obtained 1232 MEAs.
Hi, Why am I getting different results, especially in the ID column of the VCF file, using the same sample and the same MEGAnE software?
In addition, I pulled down the MEI search version "v1.0.0 2022/03/14" using a Singularity container. However, the MEI search version "v1.0.2 2022/05/03" was manually installed by us.
Using version "v1.0.0", I obtained 2040 MEIs in the MEI_final_percentile_genotyped.vcf file and 1232 MEAs in the absent_MEs_genotyped.vcf file. However, using version "v1.0.2", I obtained 2044 MEIs in the corresponding files and still obtained 1232 MEAs.